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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015799028.1_cds_XP_016463152.1_5605
CDS Infomation

[gene=LOC107786215] [db_xref=GeneID:107786215] [protein=syntaxin-binding protein 5-like] [protein_id=XP_016463152.1] [location=complement(join(740..859,941..1039,1141..1344,1444..1782,2626..3082,3884..3959,4868..4971,5063..5154,6970..7023,7750..7834,9133..9257,10703..10762))] [gbkey=CDS]
Sequence

ATGTTCGCGAAGAAGCTTTTCCAGAAAGCCACACAATATCATCATAATCAACATCAACAG
CGAAATGGCAGTGGTTTGACAGCAATTGACCTGAATGTTCGTGCTACTGTACATTATGGT
ATCCCGTCAACAGCATCAATTCTTGCAGTAGATCCCATCCAGCGCCTATTGGCCATTGGA
ACGTTGGATGGTAGGGTAAAAGTGATTGGTGGGGACAATATTGAAGGTCTCTTGATTTCT
CCAAAGCAGTTGCCCTATAAATATTTAGAGTTCCTTCAAAACCAGGGTTTTCTTGTCAGC
ATCACAAATGAAAATGATATCCAGGTTTGGAATCTCAAAAGCAGATCTGTAGCTTGTGAT
TTGCAGTGGAAATCAAATATAACTGCTTTCTCAGTTATCAATGGCTCTTCCTTCTTGTAT
GTTGGAGATGAATATGGAACAATCTCAGTTTTGAAGTTCTGTGTTGAGAACAGAGAGCTT
CTGCAACTGCCATATCAGATCTTGTGGAGTTCTCTTTCTGAAGCAGCTGGTTTTGCGAAT
GCAGATCATCAACCAGTTGTTGGAATTCTCCCCCAACCTTTTACGTCAGGAAATAGATTA
TTGATTGCATATGAGAGTGGTTTAATTATACTATGGGACGTCGTTGAAGCCCATGTTATC
ATTGTTAAAGGTGATAAAGATCTCCATTTGAAGGATGGTGCTGTAAACTTTAAAAAGAAC
GCAGATTCCAGCTCTCCTGATGATTTATTGCAGCATGAATTTGAGGAGAAAGAGATAACC
ACACTTTGCTGGGCATCCACTGATGGATCCATTCTTGCTGTTGGGTACATAGATGGAGAT
ATTCTGTTTTGGAAAACATCAAAATCAACCTTAAGCAAAGGTCAAGAAGCCGGACCATTT
GATAATGTTGTTAAGCTACAGTTGTCTTCTGCTGAAAAAAGGCTTCCTGTCATTGTCTTA
AACTGGTGGGCGAACAGTAAATCCCGGAATAGCAGCGATGGCCATCTCCTCATTTATGGC
GGTGATGAAATAGGATCCGATGAAGTCATTACAATTCTTACCCTTGATTGGTCATCTGGA
ATGGAGACTTTGAAATGTGTTGGTCGTGTTGACCTCACTTTTAGTGGCTCATTTGCCGAT
ACGATCTTATTACCAACTACTGGGACAGCAGCAACTGATGAAAAAGCTGCTTTATTTGTG
TTGATGAGTCCTGGACAACTAAAACTTTTGGATTGTTCAAGCTTGTCTGACTTGGTATCC
AAAGAGTTGAAGAAAGTATCTCTATCAGCTGAGGATTTTCCTGTAGAATTACCGACAGTT
GATCCTTCCATGACTGTGACAAAGCTTACCCAGTTGCATTCAGATGGAAACTTACCCGAG
CTTCTTCAAGAGACACCTTTATTCAAGAAGTTCTGCACAGCAACATCATCTGGGGCTAAC
GGATGGCCCTTAACTGGAGGGGTGTATAATCATATTTCTCAAGCTGAGACTAACAGGATT
CAAAGAGTTTATATAGCAGGTTACCAGGATGGATCTGTAAGGATGTGGGATGCCACTCAT
CCGGTCTTCTTTCTCCTTTGTGTCTTGGATAATGAGGTTAAAGGTGTAAATACAGTTATA
TCAACCGCTTCAGTTTCAAAAATAGATTTCTGCTTCCAGACATTAAGATTGGCAGTTGGG
GATGAGTGTGGTCTGGTACGCCTTTATGATTTCAAACATAGCGATATGGAGAACTTCCAT
TTTATTACTGATGCTAAAAGTGAAGGTAATGTAACTATTATTCCAGTATACAATGACCTT
CTTGTCATAGACTAA

Peptide Sequence

PEP ID

XP_016463152.1
PEP Infomation

PREDICTED: syntaxin-binding protein 5-like [Nicotiana tabacum]
Sequence

MFAKKLFQKATQYHHNQHQQRNGSGLTAIDLNVRATVHYGIPSTASILAVDPIQRLLAIG
TLDGRVKVIGGDNIEGLLISPKQLPYKYLEFLQNQGFLVSITNENDIQVWNLKSRSVACD
LQWKSNITAFSVINGSSFLYVGDEYGTISVLKFCVENRELLQLPYQILWSSLSEAAGFAN
ADHQPVVGILPQPFTSGNRLLIAYESGLIILWDVVEAHVIIVKGDKDLHLKDGAVNFKKN
ADSSSPDDLLQHEFEEKEITTLCWASTDGSILAVGYIDGDILFWKTSKSTLSKGQEAGPF
DNVVKLQLSSAEKRLPVIVLNWWANSKSRNSSDGHLLIYGGDEIGSDEVITILTLDWSSG
METLKCVGRVDLTFSGSFADTILLPTTGTAATDEKAALFVLMSPGQLKLLDCSSLSDLVS
KELKKVSLSAEDFPVELPTVDPSMTVTKLTQLHSDGNLPELLQETPLFKKFCTATSSGAN
GWPLTGGVYNHISQAETNRIQRVYIAGYQDGSVRMWDATHPVFFLLCVLDNEVKGVNTVI
STASVSKIDFCFQTLRLAVGDECGLVRLYDFKHSDMENFHFITDAKSEGNVTIIPVYNDL
LVID

Transcript Sequence

Gene sequence data has not been registered.